Program
Preliminary Program
| 10 October 2016 | Welcome & Introduction to Linux and R |
| 8.30-9.00 | Welcome: Thomas Dresselhaus, Julia Engelmann, Jan Medenbach 9.00-10.30 | Linux basics: speaker tba 10.30-11.00 | Coffee break 11.00-12.30 | Computational part I: Linux basics 12.30-14.00 | Lunch 14.00-16.00 | Computational part II: Introduction to R 16.00-16.15 | Coffee break 16.15-17.00 | Computational part II: Introduction to R 17.00-18.00 | Methods lecture: Stefan Kirsch - Introduction to library preparation and sequencing technologies 18.00-21.00 | Get-together
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| 11 October 2016 | Short read sequence alignment |
| 8.30-9.30 | Expert lecture: Steve Hoffmann - Alignment 9.30-10.30 | Method lecture: Nicholas Strieder - Quality control, trimming etc. 10.30-11.00 | Coffee break 11.00-12.30 | Computational part I 12.30-14.00 | Lunch 14.00-16.00 | Computational part II 16.00-16.15 | Coffee break 16.15-17.30 | Computational part II 17.30-18.00 | Final discussion
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| 12 October 2016 | Differential gene expression on sequence data |
| 8.30-9.30 | Expert lecture: Simon Anders - Differential gene expression (DESeq2) 9.30-10.30 | Method lecture: Rainer Spang - Pecularities of high-throughput data analysis 10.30-11.00 | Coffee break 11.00-12.30 | Computational part I 12.30-14.00 | Lunch 14.00-16.00 | Computational part II 16.00-16.15 | Coffee break 16.15-17.30 | Computational part II 17.30-18.00 | Final discussion 18.00-21.00 | Poster session & Get-together
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| 13 October 2016 | Differential isoforms, splicing |
| 8.30-9.30 | Expert lecture: Charlotte Soneson - Isoform level analyses 9.30-10.30 | Application lecture: Grischa Toedt - tba 10.30-11.00 | Coffee break 11.00-12.30 | Computational part I 12.30-14.00 | Lunch 14.00-16.00 | Computational part II 16.00-16.15 | Coffee break 16.15-17.30 | Computational part II 17.30-18.00 | Final discussion 19.00 | Dinner
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| 14 October 2016 | RNPs |
| 8.30-9.30 | Expert lecture: Markus Hafner- RNAs in RNPs, CLIP-seq 9.30-10.30 | Application lecture: Jan Medenbach - RIP-seq/ribo profiling 10.30-11.00 | Coffee break 11.00-12.30 | Computational part I 12.30-14.00 | Lunch 14.00-16.00 | Computational part II 16.00-16.15 | Coffee break 16.15-17.30 | Computational part II 17.30-18.00 | Final discussion & departure |
Bianca Höfelschweiger - 19.03.2020 09:32 